PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885181.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 233aa    MW: 26497.8 Da    PI: 5.9432
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.79.7e-09130170954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023885181.1 130 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 170
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDNINHHNKL IDNSWNLDLA IEEPIHHHQQ ISFDSFWPSH SLQTHQLPSS SSSNHIIPTT  60
NNVFSDPIGS QMEVELEEEE EEEPEEELGA MKEMMYKIAA MQPVDIDPAT IRKPKRRNVR  120
ISDDPQSVAA RHRRERISEK IRILQRLVPG GTKMDTASML DEAIRYVKFL KKQIRLLQST  180
QNPQCIEAPM GNLVHGVWPF TLNKPHGSTS MDPQAGTTGF TYINNGSNQL GET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-49bHLH family protein