PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884797.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 377aa MW: 42762.1 Da PI: 6.4731

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.3	2.2e-07	327	359	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_023884797.1 327 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 359 58*****************************87 PP
2	ELK	29	2.4e-10	280	301	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_023884797.1 280 ELKHELKQGYKEKIVDIREEIL 301 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MAFHDHEMSF ESFTDHHHHH HHHHQHQQQQ RLSGAVVDVS SGGGGSGAPT WLSNAILRQQ 60 SSNNNNNNNS SSSVLHDGND DVHEGSTNHR GGGGGNRNRT ESEDCEREER WEWESAKYKG 120 DIVTHPLYEQ LLSAHVACLR IATPVDQLPK IDAQLEQSQR VVAKYSVLAN GAVDQKELDQ 180 FMTHYVLLLC SFKEQLQQHV RGHAMEAVMA CWELEQSLQS LTGVSPGEGT GATMSDDEDD 240 QADSDTNLYD GSLDGPDSMG FGPLIPTESE RSLMERVRQE LKHELKQGYK EKIVDIREEI 300 LRKRRAGKLP GDTTSLLKSW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN NWFINQRKRN 360 WHTNPSSSNV LKSKRKR

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MAFHDHEMSF ESFTDHHHHH HHHHQHQQQQ RLSGAVVDVS SGGGGSGAPT WLSNAILRQQ  60
SSNNNNNNNS SSSVLHDGND DVHEGSTNHR GGGGGNRNRT ESEDCEREER WEWESAKYKG  120
DIVTHPLYEQ LLSAHVACLR IATPVDQLPK IDAQLEQSQR VVAKYSVLAN GAVDQKELDQ  180
FMTHYVLLLC SFKEQLQQHV RGHAMEAVMA CWELEQSLQS LTGVSPGEGT GATMSDDEDD  240
QADSDTNLYD GSLDGPDSMG FGPLIPTESE RSLMERVRQE LKHELKQGYK EKIVDIREEI  300
LRKRRAGKLP GDTTSLLKSW WQSHSKWPYP TEEDKARLVQ ETGLQLKQIN NWFINQRKRN  360
WHTNPSSSNV LKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	357	377	RKRNWHTNPSSSNVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-160	TALE family protein