PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884759.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 307aa    MW: 33061.9 Da    PI: 9.3257
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.3e-14103147347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023884759.1 103 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 147
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTE ASSGGCGGGS GGGGGGGDVS GENGIMLFGV RVTEGNAFRK  60
SASMTNLSQF DQQPQDPNVE SGYASDDVVH PSGRSRERKR GVPWTEEEHR LFLLGLQKVG  120
KGDWRGISRN FVKTRTPTQV ASHAQKYFLR RANLNRRRRR SSLFDITTTD TLMGSLMEEE  180
QVHQETDPLP KPQPHLSHNL GGFPVSTFPV SLSAVSHVGE SQVENLSFMR STSKPIRPIP  240
ILPVPPSSKM AELNLNQKET LPLSLKLSPA SSDEQSPPPP PPGKHSSAFQ AMPGNFSSNG  300
DSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.25e-71MYB_related family protein