PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884700.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 317aa    MW: 35395.4 Da    PI: 4.6519
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.36.5e-151311928128
             NAM  28 leleevikevdiy.kvePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116
                     l+ + ++++++iy k+ Pw++  +    ++++ ++++y F+    k++tg+r  ra++ g+W ++ k k++++++g+++g+ ++L f  ++ ++g
  XP_023884700.1  13 LNHQFIVNDCEIYgKIPPWEIYdShihyHLHTFHRKLYVFTD--LKTTTGNRVCRAAACGTWLEKSKPKRLYDSQGNVIGIDRMLSFKAKDLHSG 105
                     33333588999985679****743443333334456666665..567899**************************************7755555 PP

             NAM 117 e..ktdWvmheyrl 128
                     +  kt+W+mhe++l
  XP_023884700.1 106 KfnKTNWIMHEFSL 119
                     444*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MNKVNDSEQH THLNHQFIVN DCEIYGKIPP WEIYDSHIHY HLHTFHRKLY VFTDLKTTTG  60
NRVCRAAACG TWLEKSKPKR LYDSQGNVIG IDRMLSFKAK DLHSGKFNKT NWIMHEFSLA  120
NQEFGRINTV LCVIYKLNKG SGSDCEEANE RGLKRAFSSA TADEEFPCFN TTAAAAVISL  180
EPEPEMPSAD DEEFAAWVSG CFSSTAVVAE EASTLNTTGV MSHGQEDAQA QEHKRRRLDA  240
VADADADAFT NEECAAWIAD PTFPDEPLSQ IFSDLPPLVE VCSQSKSDSV ADYDALITSL  300
ISDPTQPDEV WSKIFCI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234238KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.11e-09NAC family protein