PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884676.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 455aa MW: 51017.2 Da PI: 6.4083

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884676.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.1	1.2e-07	393	425	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_023884676.1 393 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 425 69*****************************87 PP
2	ELK	28.7	3e-10	346	367	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_023884676.1 346 ELKHELKQGYKEKIVDIREEIL 367 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MAYHNHLSQD LPLHHFSDQH QHQHHQTIPN TSDPNSKPGS DHHTPNWLNS ALLRTQSQYN 60 DTPTTPTNNN NNNAANNNTN TNFLNLHTAS ESASQSSNQW LSRPILHRNH SDVIDDVAGD 120 SMIAATMSHE SSENMKNHNN SESLNQNNKS DHQAMGVGVV VESSGGGGGD GVMNWQNARF 180 KAEILTHPLY EQLLSAHVAC LRIATPVDQL PRIDAQLAQS QNVVAKYSPL GHGTQPMVGD 240 DKELDQFMTH YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM 300 SDDEDDQVDS DANLFDGSLD GPDTMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV 360 DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI 420 NQRKRNWHSN PSTSTVLKSK RKRSNAGENS GDRFI

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MAYHNHLSQD LPLHHFSDQH QHQHHQTIPN TSDPNSKPGS DHHTPNWLNS ALLRTQSQYN  60
DTPTTPTNNN NNNAANNNTN TNFLNLHTAS ESASQSSNQW LSRPILHRNH SDVIDDVAGD  120
SMIAATMSHE SSENMKNHNN SESLNQNNKS DHQAMGVGVV VESSGGGGGD GVMNWQNARF  180
KAEILTHPLY EQLLSAHVAC LRIATPVDQL PRIDAQLAQS QNVVAKYSPL GHGTQPMVGD  240
DKELDQFMTH YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM  300
SDDEDDQVDS DANLFDGSLD GPDTMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV  360
DIREEILRKR RAGKLPGDTT SVLKSWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI  420
NQRKRNWHSN PSTSTVLKSK RKRSNAGENS GDRFI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	423	443	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein