PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884433.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 338aa    MW: 39054.5 Da    PI: 4.6915
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.83e-5591381129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++     ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v
  XP_023884433.1   9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAV 102
                     69****************************.9***************953432233667************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ k +l+g++ktLvfykgrap+g+k+dW+mheyrle
  XP_023884433.1 103 YD-KAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 138
                     **.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MMESMESSVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKAKLIG MRKTLVFYKG  120
RAPNGQKSDW IMHEYRLESE ENGPPQEEGW VVCRAFKKRT TGQTKSIEGW DSSYFYDESS  180
GVSSVVDPID FISRQPQNFL AQNFLCKQEL EAENMRFMQS DPFVQLPQLE SPSLPLIKRP  240
SSISLISENN EEEEQINNSG CNNTKKVTDW RALDKFVASQ LSQEDRFEGD GESSFGPHDH  300
NSDMSLLLLQ SSRDDEENLN GFLNASSDCD IGICIFEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-151NAC family protein