PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023884392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 284aa MW: 31548.7 Da PI: 8.0861 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 255.8 | 2.6e-78 | 3 | 284 | 23 | 301 |
GAGA_bind 23 nlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverd......nkllalllvenslasalpvgvqvlsgtksidsl 111 +l + m+++ae+d +++er++a++e k ++ e+++a+++rd a++er++a+ e++ ++l al ++e s++ ++ ++s + i XP_023884392.1 3 HLMQTYMTVVAEKDVAVQERDMAIQELKIVLFEKEEALAERDRAIQERDAAIAEHKlilesyDALNALYFRECSMN---DDKSITVSLGNGISPA 94 6667778888888888877777777766666666666666666666665555544311111166666666666544...4446667777777777 PP GAGA_bind 112 qqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader...skaekksidlvlngvsl 203 ++ +++l++ a +r+ ++al ++ + ++++ +k++r++ +k+ + + ++ k++++ ++ d++ s e++ ++ +ln+ ++ XP_023884392.1 95 PKHGHHHLSEAALSTRNVPLSDALSTSAVGSGITKS--FRKGRRGAIDARKQVTTSTSSEWKDEHDFGGNGIDSQlgmSELEWE-TKSGLNKFNF 186 788889999999998888877777755543333333..3333333333333333333323344444444444433232666665.566******* PP GAGA_bind 204 DestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfv 298 est+P+PvCsCtG +qCYkWGnGGWqSaCCtt++S+yPLP ++++r +R++grKmS+++f+klL +L ++G++ls pvDLk+hW kHGtn++ XP_023884392.1 187 KESTMPAPVCSCTGEVQQCYKWGNGGWQSACCTTKMSMYPLPHVPNKRRTRVGGRKMSGSVFSKLLCRLIDDGHNLSAPVDLKNHWGKHGTNRYS 281 *********************************************************************************************** PP GAGA_bind 299 tir 301 ti+ XP_023884392.1 282 TIK 284 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MEHLMQTYMT VVAEKDVAVQ ERDMAIQELK IVLFEKEEAL AERDRAIQER DAAIAEHKLI 60 LESYDALNAL YFRECSMNDD KSITVSLGNG ISPAPKHGHH HLSEAALSTR NVPLSDALST 120 SAVGSGITKS FRKGRRGAID ARKQVTTSTS SEWKDEHDFG GNGIDSQLGM SELEWETKSG 180 LNKFNFKEST MPAPVCSCTG EVQQCYKWGN GGWQSACCTT KMSMYPLPHV PNKRRTRVGG 240 RKMSGSVFSK LLCRLIDDGH NLSAPVDLKN HWGKHGTNRY STIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.2 | 2e-73 | BBR-BPC family protein |