PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884392.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family BBR-BPC
Protein Properties Length: 284aa    MW: 31548.7 Da    PI: 8.0861
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind255.82.6e-78328423301
       GAGA_bind  23 nlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverd......nkllalllvenslasalpvgvqvlsgtksidsl 111
                     +l +  m+++ae+d +++er++a++e k ++ e+++a+++rd a++er++a+ e++      ++l al ++e s++     ++ ++s  + i   
  XP_023884392.1   3 HLMQTYMTVVAEKDVAVQERDMAIQELKIVLFEKEEALAERDRAIQERDAAIAEHKlilesyDALNALYFRECSMN---DDKSITVSLGNGISPA 94 
                     6667778888888888877777777766666666666666666666665555544311111166666666666544...4446667777777777 PP

       GAGA_bind 112 qqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader...skaekksidlvlngvsl 203
                      ++ +++l++ a  +r+   ++al ++   + ++++   +k++r++   +k+ +  + ++ k++++   ++ d++   s  e++ ++ +ln+ ++
  XP_023884392.1  95 PKHGHHHLSEAALSTRNVPLSDALSTSAVGSGITKS--FRKGRRGAIDARKQVTTSTSSEWKDEHDFGGNGIDSQlgmSELEWE-TKSGLNKFNF 186
                     788889999999998888877777755543333333..3333333333333333333323344444444444433232666665.566******* PP

       GAGA_bind 204 DestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfv 298
                      est+P+PvCsCtG  +qCYkWGnGGWqSaCCtt++S+yPLP ++++r +R++grKmS+++f+klL +L ++G++ls pvDLk+hW kHGtn++ 
  XP_023884392.1 187 KESTMPAPVCSCTGEVQQCYKWGNGGWQSACCTTKMSMYPLPHVPNKRRTRVGGRKMSGSVFSKLLCRLIDDGHNLSAPVDLKNHWGKHGTNRYS 281
                     *********************************************************************************************** PP

       GAGA_bind 299 tir 301
                     ti+
  XP_023884392.1 282 TIK 284
                     **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEHLMQTYMT VVAEKDVAVQ ERDMAIQELK IVLFEKEEAL AERDRAIQER DAAIAEHKLI  60
LESYDALNAL YFRECSMNDD KSITVSLGNG ISPAPKHGHH HLSEAALSTR NVPLSDALST  120
SAVGSGITKS FRKGRRGAID ARKQVTTSTS SEWKDEHDFG GNGIDSQLGM SELEWETKSG  180
LNKFNFKEST MPAPVCSCTG EVQQCYKWGN GGWQSACCTT KMSMYPLPHV PNKRRTRVGG  240
RKMSGSVFSK LLCRLIDDGH NLSAPVDLKN HWGKHGTNRY STIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-73BBR-BPC family protein