PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884331.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 529aa MW: 59466.1 Da PI: 5.0119

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.1	2.8e-43	20	143	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 pG+ FhPtd elv +yL +k+ +kk+++ e i+evd+yk+ Pw+L +++ +++ +wyfF++ +kky +g r nrat++g Wk tg+d++vl+ + XP_023884331.1 20 PGVGFHPTDVELVLYYLLRKAVKKKFPV-ELIAEVDVYKFAPWKLAdESIVKGDLKWYFFCPIEKKYLSGVRMNRATDDGHWKITGNDRPVLH-N 112 8*************************.89**********8667777889**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvg kktL+fykg+a +ge+tdWvmheyrl XP_023884331.1 113 NALVGSKKTLIFYKGKA-RGERTDWVMHEYRL 143 99*******8877.679*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MEPREYVLNC LSGKKSFPIP GVGFHPTDVE LVLYYLLRKA VKKKFPVELI AEVDVYKFAP 60 WKLADESIVK GDLKWYFFCP IEKKYLSGVR MNRATDDGHW KITGNDRPVL HNNALVGSKK 120 TLIFYKGKAR GERTDWVMHE YRLDDKHQSE HVLCKIFQKE GQGPRNNAQY GAPFKEEDWI 180 DDEEVNRCAG LSIPASVLPN NHSNSLAAGT SQLNSTASES CFSEIVPSQR VVFPSFQSNN 240 VDSEELPQVL GDDVLFSTSL VSNEDKKNKK PIHDRTAEVD PNNKHLGYLA GPSEDVYTGS 300 LYNCLYIRDL DTPLNIHPEA GEPQHVPFNG LNAGHNDYID SEQFPTSKNT INDGTVDVEL 360 PVDPIFEHNG LNMRDLDKPL NPEAGESQHF LANSFGAPEV LYAPHQSDPG PDLLCEIENA 420 SHNGTAKASF PPDDPDFFEG LENPGITTSR HGDVPPSSLE FDMDELWKQL DCPLETGESQ 480 HIRTNDLEQF PVNSCHASQQ LPGSDLSQKD SSNKKERKRK RKEHNDERK

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MEPREYVLNC LSGKKSFPIP GVGFHPTDVE LVLYYLLRKA VKKKFPVELI AEVDVYKFAP  60
WKLADESIVK GDLKWYFFCP IEKKYLSGVR MNRATDDGHW KITGNDRPVL HNNALVGSKK  120
TLIFYKGKAR GERTDWVMHE YRLDDKHQSE HVLCKIFQKE GQGPRNNAQY GAPFKEEDWI  180
DDEEVNRCAG LSIPASVLPN NHSNSLAAGT SQLNSTASES CFSEIVPSQR VVFPSFQSNN  240
VDSEELPQVL GDDVLFSTSL VSNEDKKNKK PIHDRTAEVD PNNKHLGYLA GPSEDVYTGS  300
LYNCLYIRDL DTPLNIHPEA GEPQHVPFNG LNAGHNDYID SEQFPTSKNT INDGTVDVEL  360
PVDPIFEHNG LNMRDLDKPL NPEAGESQHF LANSFGAPEV LYAPHQSDPG PDLLCEIENA  420
SHNGTAKASF PPDDPDFFEG LENPGITTSR HGDVPPSSLE FDMDELWKQL DCPLETGESQ  480
HIRTNDLEQF PVNSCHASQQ LPGSDLSQKD SSNKKERKRK RKEHNDERK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	514	522	KKERKRKRK
2	517	522	RKRKRK
3	517	523	RKRKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-72	NAC family protein