PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884145.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 325aa    MW: 35263.4 Da    PI: 10.0393
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884145.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00064129151123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C++ F ++  L  H++ H
  XP_023884145.1 129 FTCNFCNRNFYSSQALGGHQNAH 151
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEAQAHGNSL HRPCASEASS ISATSEGPPP PSLKKGLGVD ESNKVMIMKM KEKVSKHVSD  60
HADQPSHSLG SSSSRVLLDL KLSNDDSNRG SSKVELNLIN SMNSSSSQVP NEPVSDENTQ  120
EKQPGNRVFT CNFCNRNFYS SQALGGHQNA HKQERALAKR RQGMEMGAFG HPHHFPYYPY  180
SNLSTHPLYG SLNRSLSSSS SSSPLGVRME SMIHKPSFPW SSSPGYRFGH VGWSRQALLN  240
PQPNMDRLRM EGFQAHNGGF GVTGGNSSPA IKLEEINTNA LRNLGGSSTI NTSKIDIKPT  300
VTGDYLRRKG PPKNGAPGLD LSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.13e-21C2H2 family protein