PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883375.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 1172aa MW: 131343 Da PI: 9.4664

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.1e-10	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_023883375.1 45 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSIEMV 80 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1172 aa Download sequence
MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKKYYD KLGPQWSKEE LERFYEAYRK 60 YGKDWKKVAA VVRNRSIEMV EALYTTNRAY LSLPEGTASV VGLIAMMTDY YNVLEESDSE 120 RESNEALTSE KPLKRKRGKV QPSVSKDPCQ TRSIASSDGY LSFLKRRRFD GNEPCAKGKR 180 TPRFPISYSL KRDDAEINVS PNKRGRKSDS DANDDEVAHG AALALAEVSQ RGGSPQISQT 240 PYRRTEHIKS APLRTWGKMN QQSDTAQANL RYAAMDENWL EGSIGSRGVE NGDYARDTSS 300 LMDMEGVGTV EVHRKGKKFY RKKEKVQDIA NHQYDDGGEA CSGTEEGLNS GVSKGKFDIE 360 VSNSKSERFS PQGQRKRSKK LSFGGESTGL DALLELADLS LKMPISTMES DSSVQLKEER 420 AILDMDDKAS LPEAMSTSHC ADKIKFLGSK QKARHTIAGV DGTNSRKLKI GRDSDIDVNV 480 ASEEKEQLQL ADKAWKRKRK SMVSKLQISN DKAHTDSLLS EPLKTEVLAE EENKPVIIGK 540 RTGQSFTFLK PWKSVRSSDG SLDSDQKRAE TDLSVSTTEI PAASQSSLSS KRKSKRKMGQ 600 PKPFLKETKS SHGNRFINRH KYSTSLSDRP PYLKQVLLCC LSSSLVRRWC TFEWFYSAID 660 YPWFAKREFV EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLLEE REKLKQYRDS 720 VRKHYTELRT GIREGLPTDL ARPLSVGQRV IALHPKTREL HDGSVLTVDQ DKCRVQFDRP 780 EIGVWFVKDI DCMPLNPLDN MPEALKRQNI TIDKFSLLSK EPQMNGHPNF GGSMMFASSG 840 NLDKVTSPMN TFVQQGKVDT NHAIAQAKTA AIDIGSLQQE AHSQPSMLPQ NHAKEADIRA 900 LTELTRALDK KEALLMELRS TNNDIVENQN EGDCSLKDSE PFKKHYAMVS SALLNLRQRN 960 TYPGNTLHPW LKPPSNSSLN GSLTSCYDNS FISQESGSSV VEIVNGSRLR ARTMVDAAIQ 1020 AFTFRKEGED AFVRIGETLD SIDNQQLTSD SGIPVIRSQQ QVNGGLGNQN QLSSCKAEPL 1080 FSSDASGAKP CNDSDENEAR IPSGLITSCV ATLLMIQTCT ERQYPPADVA QILDSALKSL 1140 HPYCTQNLSI YREIQMCMGR IKTQILALVP TT

Sequence ? help Back to Top

Protein Sequence Length: 1172 aa Download sequence

MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKKYYD KLGPQWSKEE LERFYEAYRK  60
YGKDWKKVAA VVRNRSIEMV EALYTTNRAY LSLPEGTASV VGLIAMMTDY YNVLEESDSE  120
RESNEALTSE KPLKRKRGKV QPSVSKDPCQ TRSIASSDGY LSFLKRRRFD GNEPCAKGKR  180
TPRFPISYSL KRDDAEINVS PNKRGRKSDS DANDDEVAHG AALALAEVSQ RGGSPQISQT  240
PYRRTEHIKS APLRTWGKMN QQSDTAQANL RYAAMDENWL EGSIGSRGVE NGDYARDTSS  300
LMDMEGVGTV EVHRKGKKFY RKKEKVQDIA NHQYDDGGEA CSGTEEGLNS GVSKGKFDIE  360
VSNSKSERFS PQGQRKRSKK LSFGGESTGL DALLELADLS LKMPISTMES DSSVQLKEER  420
AILDMDDKAS LPEAMSTSHC ADKIKFLGSK QKARHTIAGV DGTNSRKLKI GRDSDIDVNV  480
ASEEKEQLQL ADKAWKRKRK SMVSKLQISN DKAHTDSLLS EPLKTEVLAE EENKPVIIGK  540
RTGQSFTFLK PWKSVRSSDG SLDSDQKRAE TDLSVSTTEI PAASQSSLSS KRKSKRKMGQ  600
PKPFLKETKS SHGNRFINRH KYSTSLSDRP PYLKQVLLCC LSSSLVRRWC TFEWFYSAID  660
YPWFAKREFV EYLNHVGLGH IPRLTRVEWG VIRSSLGKPR RFSEHFLLEE REKLKQYRDS  720
VRKHYTELRT GIREGLPTDL ARPLSVGQRV IALHPKTREL HDGSVLTVDQ DKCRVQFDRP  780
EIGVWFVKDI DCMPLNPLDN MPEALKRQNI TIDKFSLLSK EPQMNGHPNF GGSMMFASSG  840
NLDKVTSPMN TFVQQGKVDT NHAIAQAKTA AIDIGSLQQE AHSQPSMLPQ NHAKEADIRA  900
LTELTRALDK KEALLMELRS TNNDIVENQN EGDCSLKDSE PFKKHYAMVS SALLNLRQRN  960
TYPGNTLHPW LKPPSNSSLN GSLTSCYDNS FISQESGSSV VEIVNGSRLR ARTMVDAAIQ  1020
AFTFRKEGED AFVRIGETLD SIDNQQLTSD SGIPVIRSQQ QVNGGLGNQN QLSSCKAEPL  1080
FSSDASGAKP CNDSDENEAR IPSGLITSCV ATLLMIQTCT ERQYPPADVA QILDSALKSL  1140
HPYCTQNLSI YREIQMCMGR IKTQILALVP TT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	591	598	KRKSKRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein