PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882171.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family BBR-BPC
Protein Properties Length: 286aa    MW: 31692.4 Da    PI: 10.442
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind330.83.7e-10112861301
       GAGA_bind   1 mdddgsre.rnkgyyepa.aslkenlglqlmssiaerdakirernlals..ekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     md d+s + rn+gyyep  +slk +lglqlmss+++ ++ ir rn+ l+  ++++++++rd         m++ +rd+++++        ++k++
  XP_023882171.1   1 MDGDNSLNmRNWGYYEPPtPSLKGHLGLQLMSSMPQEQQLIRGRNAMLIatGTNGTLHHRDigvshsafpMDY-MRDAWINQ--------REKFI 86 
                     899999999*******998****************999999888887652267999*************9999.99****99........7899* PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l++ n       ++++vl++t+s +++q+       +++ ++++ e    +  +e++ +a+e+   kkrq ak pk++k+kk+k+  +++k +
  XP_023882171.1  87 NVLPTPN-------PAYSVLPETSSSHHMQM------VQQPPDMSKDER---MISVEETGVATENGPIKKRQAAKAPKTPKEKKAKRALRAPKAE 165
                     *999766.......57899**********99......334445444443...333456899999***********************88888655 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                     +  +sa++ + +++k++++v+ gv  D+s++P+PvCsCtG+++ CY+WG+GGWqSaCCtt +S+yPLP+stkrrgaRiagrKmS gafkk+LekL
  XP_023882171.1 166 S-CPSAPRARSTTRKTTEIVISGV--DISGIPIPVCSCTGTPQHCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKL 257
                     5.55556778889********997..89******************************************************************* PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aaeGy++snp+DL++hWAkHGtnkfvtir
  XP_023882171.1 258 AAEGYNFSNPIDLRTHWAKHGTNKFVTIR 286
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDGDNSLNMR NWGYYEPPTP SLKGHLGLQL MSSMPQEQQL IRGRNAMLIA TGTNGTLHHR  60
DIGVSHSAFP MDYMRDAWIN QREKFINVLP TPNPAYSVLP ETSSSHHMQM VQQPPDMSKD  120
ERMISVEETG VATENGPIKK RQAAKAPKTP KEKKAKRALR APKAESCPSA PRARSTTRKT  180
TEIVISGVDI SGIPIPVCSC TGTPQHCYRW GSGGWQSACC TTGMSMYPLP MSTKRRGARI  240
AGRKMSIGAF KKVLEKLAAE GYNFSNPIDL RTHWAKHGTN KFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.17e-85BBR-BPC family protein