PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879689.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 335aa    MW: 37704.7 Da    PI: 4.5812
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.2e-12168211654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_023879689.1 168 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 211
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MELTQHGFLE ELLAPRRDTW SAFSNGVNEL FPNGWNFDAI EENPVLATPT APPFVGFSTP  60
TGPSFECPFS DQAYPFLDGF TEIETSYSKN EKPLPFLSQE DYPSMVEDEE LGFLGCENLS  120
LQERNSSGCK VEMEVMEQAA DIPGFNMGFC GEKKSKSKKL EGQPSKNLMA ERRRRKRLND  180
RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LLERINKLQE EETEESKNQL NLMGISKELK  240
PNEVLVRNSP KFDVERKDMD TRIGICCAAK PGLLLSTVHT IEALGLEIQQ CVISCFNDFS  300
MHASCSEGAE QQTFVSSEDI KQALFRNAGY GGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171178ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-90bHLH family protein