PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023878458.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 313aa MW: 34563.8 Da PI: 5.8829 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.2 | 6.9e-33 | 171 | 228 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+ XP_023878458.1 171 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTIVITTYEGQHCHH 228 8******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MEEGDKSDPG TEFASDSSWP LGPHDSDNVY FFANNDRGGR RGEDDTTILS EFGWNLRPEN 60 NDPNPIGGLD DDASDFTRSF VFPDQNKDTT GSALQSSDPA VPSGSESKAG EATTSNNPSV 120 SSTSSEDPPE KSTGSGGKPP EIPNKVRKKG QKRIRQPRFA FMTKSEVDHL EDGYRWRKYG 180 QKAVKNSPFP RSYYRCTNSK CTVKKRVERS SDDPTIVITT YEGQHCHHTI GFPRGGIISQ 240 EAFAGQLAPP ISHFYYPTVH HQLPQENPFF ITQTRQTPGE AAGESRVMPQ TNALPPTDEG 300 LLGDIVPPNM RNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 9e-74 | WRKY family protein |