PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023878120.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 466aa MW: 51770.1 Da PI: 6.5773

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023878120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	68	3.2e-21	44	101	3	60
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaik 60 ++++ + ++hTkv+gR RRvR++++c +F L++eLG+ +d++ti+WLl q p XP_023878120.1 44 KRRRCTRDRHTKVDGRHRRVRIPITCCPGIFRLTEELGHRSDGQTIQWLLSQVRPDLV 101 578889**********************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MEFEESVQLV LQPQHNVEDD NLNAPDSQII VQQQEQEQQQ QQLKRRRCTR DRHTKVDGRH 60 RRVRIPITCC PGIFRLTEEL GHRSDGQTIQ WLLSQVRPDL VLSGRNSGSS NSVPPSLTLP 120 MSKYVPVKME EDGLLEHKAL TLSPRPTVRA TVVQASTVFY DTPATLDKAE RLIAGAAAYG 180 SQIVVFPEAF VGGYPHAVMF EGLTDTHLTW ENKQFQMYFA SAIDVPGPEV DRLAKISGKY 240 KVHLVMGVVE RVGYKLFSAI LFFDSLGRYL GKHRKVMPLA SECAMWWSGE KSLLNVYETP 300 IGKIGGLICW DNRMPSLRTQ LYSKGIEIYC APTAEAREIW RASMTHIALE GGCFVLSANQ 360 FCRRKDYLQS PECVSGDSNG NTSMDTIICA GGSVIISPSG TILAGPNYQG ESLISADLDL 420 GEIVRAKLDF SGIGHYIGQN CVNQISDIPN PICYKTAVKS EVLDEQ

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MEFEESVQLV LQPQHNVEDD NLNAPDSQII VQQQEQEQQQ QQLKRRRCTR DRHTKVDGRH  60
RRVRIPITCC PGIFRLTEEL GHRSDGQTIQ WLLSQVRPDL VLSGRNSGSS NSVPPSLTLP  120
MSKYVPVKME EDGLLEHKAL TLSPRPTVRA TVVQASTVFY DTPATLDKAE RLIAGAAAYG  180
SQIVVFPEAF VGGYPHAVMF EGLTDTHLTW ENKQFQMYFA SAIDVPGPEV DRLAKISGKY  240
KVHLVMGVVE RVGYKLFSAI LFFDSLGRYL GKHRKVMPLA SECAMWWSGE KSLLNVYETP  300
IGKIGGLICW DNRMPSLRTQ LYSKGIEIYC APTAEAREIW RASMTHIALE GGCFVLSANQ  360
FCRRKDYLQS PECVSGDSNG NTSMDTIICA GGSVIISPSG TILAGPNYQG ESLISADLDL  420
GEIVRAKLDF SGIGHYIGQN CVNQISDIPN PICYKTAVKS EVLDEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-21	TCP family protein