PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876315.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 218aa MW: 25138.3 Da PI: 8.9162

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.7	1.5e-21	81	140	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_023876315.1 81 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 140 7***************99************************************97 PP
2	Wus_type_Homeobox	118.5	2.9e-38	81	142	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+++i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_023876315.1 81 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 142 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MGSMKVHQFA RGFWEHEPSL TLGCKRLRPL APKLANTDTS GVTAFDLKSF IRPESGPRKL 60 GSSEDKDKRD PPQVETHPGG TRWNPTQEQI GILEMLYRGG MRTPNAQQIE QITAQLGKYG 120 KIEGKNVFYW FQNHKARERQ KQKRNSLGLS HCPRTPTAIT TIALDTRGEL EREEDSPYKR 180 KCRSWGFETL EEEEEERRSC KEEGDRTLEL FPLHPESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	4e-76	WOX family protein