PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875953.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 303aa    MW: 32435.4 Da    PI: 7.4734
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015120142123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C++ F++   L  H  +H
  XP_023875953.1 120 YECKTCNRAFPSFQALGGHRASH 142
                     99**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDGQEEVAVM GSNGNTQIVK GKRTKRQRPL SPFDLALTSS SSSVGLAGSG NTSDYASISS  60
PSAGTNCEVD VYESTEEEED MANCLILLAK GVGTRQSPEL ATTTTTATTA TTTKSGFYIY  120
ECKTCNRAFP SFQALGGHRA SHKKPKPMIE EKKAAPTPPS TEYVEEAQIN IRNNCTTSAP  180
PKHVQIGAAP NKGLINTNNN KTKIHECSIC GLEFMSGQAL GGHMRRHRSA VAASPSQMVT  240
MGVETTISTT LESKHVEIKP RRNILSLDLN LPAPEDDSKF QFTSSAAQQS LVFSASALVD  300
CHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-62C2H2 family protein