PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873907.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 587aa MW: 65655.6 Da PI: 6.1437

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.2e-09	469	517	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v + G g+W+ I r m +Rt+ ++k++w+++l XP_023873907.1 469 SWTSSEVMKLIEGVSRCGVGRWAEIKRLMFsssSRRTPVDLKDKWRNLL 517 5******************************9***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MNITSKDSLI TSDEIANMFT SKFSEVDLSL FAASEQEAIG VEHFLVEPKC NQNLLGGAFD 60 FEAFHSQKFF DVEDFSGAIE YDEIKADFSA VHSNLTREAQ EETPELLEEM LQVAGDEVLD 120 GKTRLPTCEE FILDAKPADE ATILDHGSCK VSCMGNVGLG RYSPNFHERD SAAKISNMSS 180 ASVPALESTH NQNSPVLDEM TVQELHEAFK SMFGRETSVT DKQWLKCHLL FGLQNQVELD 240 NGLNLIKRGT TSYKIGGKTV CSSSCDSSGS ATGSINSVLV DKTMAVGWHV ERKKFAGLDT 300 LKTSSEDSKI DLCSLDGGDE ALVTQKRLRK PPKRYIEESM EDKSRYCKRK NGDCEVVYKE 360 SREKLMSVRS HKRLYPKGFG AAPMVCQDKS FKGSCIQVPF GLPVEEGHTE TDSSSWNSED 420 FKDDRLSSPN EEVDTEPHSA RSQDEICGDG FITRSSTQKV SSHRKHHISW TSSEVMKLIE 480 GVSRCGVGRW AEIKRLMFSS SSRRTPVDLK DKWRNLLRAS YAQLQCKRKV KQGQKQVSNQ 540 VPESVLWRVR ELSTTYPYQR ERKFKVSCTD SSNFSASTNN ILVPLST

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MNITSKDSLI TSDEIANMFT SKFSEVDLSL FAASEQEAIG VEHFLVEPKC NQNLLGGAFD  60
FEAFHSQKFF DVEDFSGAIE YDEIKADFSA VHSNLTREAQ EETPELLEEM LQVAGDEVLD  120
GKTRLPTCEE FILDAKPADE ATILDHGSCK VSCMGNVGLG RYSPNFHERD SAAKISNMSS  180
ASVPALESTH NQNSPVLDEM TVQELHEAFK SMFGRETSVT DKQWLKCHLL FGLQNQVELD  240
NGLNLIKRGT TSYKIGGKTV CSSSCDSSGS ATGSINSVLV DKTMAVGWHV ERKKFAGLDT  300
LKTSSEDSKI DLCSLDGGDE ALVTQKRLRK PPKRYIEESM EDKSRYCKRK NGDCEVVYKE  360
SREKLMSVRS HKRLYPKGFG AAPMVCQDKS FKGSCIQVPF GLPVEEGHTE TDSSSWNSED  420
FKDDRLSSPN EEVDTEPHSA RSQDEICGDG FITRSSTQKV SSHRKHHISW TSSEVMKLIE  480
GVSRCGVGRW AEIKRLMFSS SSRRTPVDLK DKWRNLLRAS YAQLQCKRKV KQGQKQVSNQ  540
VPESVLWRVR ELSTTYPYQR ERKFKVSCTD SSNFSASTNN ILVPLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein