PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023873896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 280aa MW: 31204.8 Da PI: 10.1869 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 343.8 | 4.1e-105 | 1 | 280 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalse.kkaavaerd.........maflqrdkalaernkalverdnkl 81 mddd+ + rn+gyyep+ +k +lglqlmss+a+rd+k r+ n + + ++++++rd +++ rd+++++ ++k+ XP_023873896.1 1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMADRDSKNflpgRDPNSMMVNpANGTYHPRDcvvseppvpINY-VRDSWVNQ--------RDKY 84 9***9999*******99..********************9***998887766157899****999999999999.89999999........789* PP GAGA_bind 82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskk 176 l++l+++ ++ vl++t+ ++slq+ l+++ + e + i ++++++ke ++kkrq a+ pk++kakk++k +++ XP_023873896.1 85 LNMLPTNP--------NYAVLPDTSGAHSLQM-----LQPPDLS--RDE--RVGRI-DEPPVKKEGGQMKKRQGASAPKAPKAKKPRK----PRD 157 ****9655........4899************.....4444443..222..22333.3466777888888999999999999999999....455 PP GAGA_bind 177 kvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLek 271 + +++ +r+k kk++dlv+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+Lek XP_023873896.1 158 NGNASV--QRVKPAKKNMDLVINGIDMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEK 250 566666..79************************************************************************************* PP GAGA_bind 272 LaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 LaaeGy+++n++DL++hWA+HGtnkfvtir XP_023873896.1 251 LAAEGYNFANAIDLRTHWARHGTNKFVTIR 280 *****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM ADRDSKNFLP GRDPNSMMVN PANGTYHPRD 60 CVVSEPPVPI NYVRDSWVNQ RDKYLNMLPT NPNYAVLPDT SGAHSLQMLQ PPDLSRDERV 120 GRIDEPPVKK EGGQMKKRQG ASAPKAPKAK KPRKPRDNGN ASVQRVKPAK KNMDLVINGI 180 DMDISGIPIP VCSCTGAPQQ CYRWGCGGWQ SACCTTNVSM YPLPMSTKRR GARIAGRKMS 240 QGAFKKVLEK LAAEGYNFAN AIDLRTHWAR HGTNKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-111 | BBR-BPC family protein |