PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023873613.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 388aa    MW: 44314.9 Da    PI: 6.5037
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023873613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.93.1e-22166253190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY++YA+++GFsvrk+  k+  + g++++rtf+Cskeg+r  +k + e+ + +r+ +r+gC a+++ +++kdg  ev +++++HnHe+a
  XP_023873613.1 166 EFYKDYAHQIGFSVRKQFIKRG-NMGQVIRRTFCCSKEGERGVDKCQ-EQVHFHRPISRVGCLAQMTCQLQKDGMLEVVSFHEQHNHEFA 253
                     6***************998887.7788*****************999.99999***********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MKLAPGQVSF LVLIPDSPGR GIIGNYGVVA SHIQRETATW IHCDVPALGS DHWVMSVAGS  60
GAMDRRIALL HGSEELRRQC LGDEDDYFCG YLSDEDKDDS FGGNLCDEHK DDSFRNNLYD  120
ENRDDCSTFF KEAQVVPTHG SPKKSSTAID VPKIGMKFDC DDNAYEFYKD YAHQIGFSVR  180
KQFIKRGNMG QVIRRTFCCS KEGERGVDKC QEQVHFHRPI SRVGCLAQMT CQLQKDGMLE  240
VVSFHEQHNH EFASSPMKHM LRSKRKIAPA QKAIANDVEK SGISIKQTID LLSMQVGGHE  300
NLGFLDYDYK NHVHRERRKA LKKGDARAVM EYFHNMQLED PFYFYSIQVD DDGLILNIFW  360
ANARSIVDYG HFGDVMCFDR TYRTNQYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-44FAR1 family protein