PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873398.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Dof

Protein Properties

Length: 320aa MW: 34804.8 Da PI: 9.2948

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.2	3.6e-38	72	132	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWtkGGalr vPvGgg+r+nkk++ XP_023873398.1 72 PEVALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTKGGALRSVPVGGGCRRNKKNK 132 56789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MVFSSVPVYL DPHNWQQQPN HHHQQGSHDS AQSPQLLPPL IPPPTHHVGA GACSIRPGSM 60 ADRARLAKLP QPEVALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW TKGGALRSVP 120 VGGGCRRNKK NKSSRTKSQA NSTERQTGFS NSNNAIPACT SDLSENLPLK QPFQLPFFAS 180 LQNHTRYGVG NLAGLNFNDI QAQTDMGYQI GNSTSGGISS TILPSGGAVD QWRLHQFPFL 240 GGFDSSSGLY SIQSDHGVEA PSPLVGDNEL RTMPMSSSSR VSQLTKMEAS QTQNLSGLNW 300 GGNAWTDISG LNSSSTSQLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	1e-42	Dof family protein