PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873391.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 834aa MW: 95923.2 Da PI: 7.6231

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.3	1.3e-23	68	154	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA ++GFs+rk k ++ + +++i +r+f Cskeg++ +e+ e+++ ++ etrtgCka ++ + e +++w+vt ++ eHnHela XP_023873391.1 68 LYNNYALRTGFSIRKGKPRYFNGTKNIRQREFLCSKEGFKVDEDPC-EEKNWNKLETRTGCKAFIRFTVE-NDVWRVTAFNPEHNHELA 154 7**************************************99988.89999*************9.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 834 aa Download sequence
MIGKFLASPG LQGHQVDLVV PANKSKTVIC NSSDIEGIED CLFVERIENS DDNLLDKVTY 60 TENEAYNLYN NYALRTGFSI RKGKPRYFNG TKNIRQREFL CSKEGFKVDE DPCEEKNWNK 120 LETRTGCKAF IRFTVENDVW RVTAFNPEHN HELALPSKRH LLRSGRRISK PNAGLIDSMV 180 NAGISTKNTY LYLTEEVGGS ENVGFTEKDC YNHVNTKKMS TISAGDAQSL LNHFKKRQIE 240 DPMFFYTVQV DQKNRMTNFF WRDGRSRVDY DCFGDVVVFD TTYRTNRYNL TCAPFVGVNH 300 HWQNVIFGCA FLLDETTASF KWLFKSFLDS MGNRSPITIF TDQDQAMSNA IEEVFSNTHH 360 RLCLWHISKN APSYFGELNS NSEFQSLWNK CQKYCDSELE FQNTWDKMMH KFNLEDHHWL 420 NMMYKIRHKW STAFTKDSFT AEFKASSRSE STNQVLNNIA DTTISLTNFV IKYESVLAGM 480 RSSEFNEDFR CKQGAPQRAV KKSGILGHAA QVYTCKIFRL FEYEFLNSLA IEWKQVDCQD 540 TIDVFEVKEE DSERVRIVHF DHFNSNISCS CKKFESLGIL CCHALRVFNL KNLTKIPSQY 600 VLKRWTKEAK KGMMAYEQDN HSSGDAKEAE IVWRNSMLRI ANTIISKSQG DDSLKSICQK 660 ILLGLDEKIE RESSKLGSNA NLEENEVVEH NIADEMLGLS NHVSVLNPPC VRSKGLRKDR 720 LKGHFEKRKT KSFKDASSSP IYQPPNPYSH LGFTSDNAHG QSYMSWTNHS QEMGCVNVPF 780 TTMLQDTNVI TQLSQNPTTY IPSQMNSLMY SSKQSNSTHI QEVGRLKMPC NQES

Sequence ? help Back to Top

Protein Sequence Length: 834 aa Download sequence

MIGKFLASPG LQGHQVDLVV PANKSKTVIC NSSDIEGIED CLFVERIENS DDNLLDKVTY  60
TENEAYNLYN NYALRTGFSI RKGKPRYFNG TKNIRQREFL CSKEGFKVDE DPCEEKNWNK  120
LETRTGCKAF IRFTVENDVW RVTAFNPEHN HELALPSKRH LLRSGRRISK PNAGLIDSMV  180
NAGISTKNTY LYLTEEVGGS ENVGFTEKDC YNHVNTKKMS TISAGDAQSL LNHFKKRQIE  240
DPMFFYTVQV DQKNRMTNFF WRDGRSRVDY DCFGDVVVFD TTYRTNRYNL TCAPFVGVNH  300
HWQNVIFGCA FLLDETTASF KWLFKSFLDS MGNRSPITIF TDQDQAMSNA IEEVFSNTHH  360
RLCLWHISKN APSYFGELNS NSEFQSLWNK CQKYCDSELE FQNTWDKMMH KFNLEDHHWL  420
NMMYKIRHKW STAFTKDSFT AEFKASSRSE STNQVLNNIA DTTISLTNFV IKYESVLAGM  480
RSSEFNEDFR CKQGAPQRAV KKSGILGHAA QVYTCKIFRL FEYEFLNSLA IEWKQVDCQD  540
TIDVFEVKEE DSERVRIVHF DHFNSNISCS CKKFESLGIL CCHALRVFNL KNLTKIPSQY  600
VLKRWTKEAK KGMMAYEQDN HSSGDAKEAE IVWRNSMLRI ANTIISKSQG DDSLKSICQK  660
ILLGLDEKIE RESSKLGSNA NLEENEVVEH NIADEMLGLS NHVSVLNPPC VRSKGLRKDR  720
LKGHFEKRKT KSFKDASSSP IYQPPNPYSH LGFTSDNAHG QSYMSWTNHS QEMGCVNVPF  780
TTMLQDTNVI TQLSQNPTTY IPSQMNSLMY SSKQSNSTHI QEVGRLKMPC NQES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-117	FAR1 family protein