PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872108.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 492aa MW: 53215.6 Da PI: 7.814

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.6e-17	60	146	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y+++A++ GF + +++s+ + ++g+ t+ C + gkre++ kk + + r++ +t+Ckak++v + +dgk+++ ++ leHnHel+p XP_023872108.1 60 NYYSKFAQREGFGIYRRSSRCR-DDGKLNYFTLACARAGKRESTAKK---KFSLRQSPKTNCKAKVNVALGSDGKFHLCHVILEHNHELSP 146 69***********9987775.9999************9888...889999*******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEGDSMVNVT LENDNQGSSC DKERVDGDKV EEHNVGGLGN EEVETPRAGM VFVSPEEVRN 60 YYSKFAQREG FGIYRRSSRC RDDGKLNYFT LACARAGKRE STAKKKFSLR QSPKTNCKAK 120 VNVALGSDGK FHLCHVILEH NHELSPGMFH SNRCKKSGGP RAQRRSKAKD PAEAIVHQDC 180 PSLVGVAASC EIIPSVDSAV EGVNVTKQLA NGDKHHLFPN TGHPTSESTL NHLKRRSSAL 240 ENSQNSQDVF KLALAKKAVE LVKSGMVIGL GTGGTSLLME ELGKLIGEGK LKDIVAVGAN 300 YHSRLLAKQF GLRTVDLNDV DNIDIVFDGV DEVDFNKNLL KGGEAAHTVQ KVVYSMANVC 360 IILAEHTKVV HRLGSKFPVA VEVLPLATSP VSRRLIALGG VPEIRSALRK DGPVITDLGN 420 MIIDVSFPNG IQNPAELEKN INVIPGVVDN GIVSGVATSV LVAVRDGGHV NVMNLEEFVE 480 VVLGWRYATS TL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEGDSMVNVT LENDNQGSSC DKERVDGDKV EEHNVGGLGN EEVETPRAGM VFVSPEEVRN  60
YYSKFAQREG FGIYRRSSRC RDDGKLNYFT LACARAGKRE STAKKKFSLR QSPKTNCKAK  120
VNVALGSDGK FHLCHVILEH NHELSPGMFH SNRCKKSGGP RAQRRSKAKD PAEAIVHQDC  180
PSLVGVAASC EIIPSVDSAV EGVNVTKQLA NGDKHHLFPN TGHPTSESTL NHLKRRSSAL  240
ENSQNSQDVF KLALAKKAVE LVKSGMVIGL GTGGTSLLME ELGKLIGEGK LKDIVAVGAN  300
YHSRLLAKQF GLRTVDLNDV DNIDIVFDGV DEVDFNKNLL KGGEAAHTVQ KVVYSMANVC  360
IILAEHTKVV HRLGSKFPVA VEVLPLATSP VSRRLIALGG VPEIRSALRK DGPVITDLGN  420
MIIDVSFPNG IQNPAELEKN INVIPGVVDN GIVSGVATSV LVAVRDGGHV NVMNLEEFVE  480
VVLGWRYATS TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	1e-11	FAR1 family protein