PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023871959.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 310aa    MW: 33602.5 Da    PI: 4.7533
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023871959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.51.4e-16220255134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_023871959.1 220 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKG 255
                     *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MAESNHEASI YNSNIQQQQQ QLQNEIEDED DDVVGAEEES IDNPQMRFVP VSTLNGAVQE  60
VAPNAVFVPG GSDYPPVNTG NGGSDQLTLS FQGEVYVFDA VSPDKVQAVL LLLGGYEIPS  120
GIPAVGTIPL NQRGMNDFSG RSIQPQRAAS LSRFREKRKE RCFDKKIRYN VRKEVALRMQ  180
RKKGQFTSSK AISEELGSDS SVYSTTQGSG QDDSMQETIC THCGISSKST PMMRRGPAGP  240
RTLCNACGLK WANKGILRDL SKVSNAAIQD PPVKLIEQNN GEANDLVMVT TATDIVPSSN  300
GDISAVTAER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-80GATA family protein