PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023871942.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 369aa    MW: 40062.5 Da    PI: 4.644
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023871942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.62.3e-15227263135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  XP_023871942.1 227 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 263
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MEMVNPQPLQ VRPLEVEEER ENHLVQVPIE MDGDEGGSEY EYMNGRSAQH EAMNGGGVGV  60
GGGGGVEVEA RASGASGSAS GSASASASAS ASRTSELTIA FEGEVYVFPA VTPDKVQAVL  120
LLLGGCDIPN SVPSSQFLLQ QNSKGIGETS RGSKLSRRIA SLVRFREKRK ERCFEKKIRY  180
TCRKEVAQRM HRKNGQFASL KNSFKVAGEN WDSSDGTPCP APILRRCQHC GISEKSTPAM  240
RRGPAGPRSL CNACGLMWAN KGTLRDLTKA GRTISFDQNE PETPADIKPS TMEPENSYAN  300
QDEQDFLDVA EAVTKHLSIQ LDNPSIGLDE QETLDELANA SGTEFEIPEN FDDQVDIDDS  360
SMVTDWPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-56GATA family protein