PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023871355.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 278aa    MW: 31599 Da    PI: 9.764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023871355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.87.9e-08143186755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +  rrRR+++ ++ + L++l+P++     +K++ a++  +A +YI  Lq
  XP_023871355.1 143 KLARRRRQKLSEKTQSLQRLMPWD-----TKMDMATMMDEAHKYITFLQ 186
                     567********************9.....9****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MPSSSATTTS TFPFTFFSED FPALNLNRSG ESSSLNYAVS ESEFKLPKTE PFYYPSDGFL  60
ETQPFNFLSI PIPNSTSSSS PPFHHLPDLH SLELTRAQPV QVQLYPPLLP ELPSKRVRVD  120
SATRSQETLD SIVQSCRVMP QSKLARRRRQ KLSEKTQSLQ RLMPWDTKMD MATMMDEAHK  180
YITFLQAQLK ALQTMPPSSS SSSSSANYEF GGLERLTRNQ VLRVLLNSRV AQTVLYSKAR  240
CVVSVEQLDL LQKLIFQQRQ QQQQLVLPPS SSRLFFNH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-22bHLH family protein