PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023871208.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 444aa MW: 50820.5 Da PI: 8.3414

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023871208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	5e-05	284	306	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 kC C+k+F ++ L++H+r H XP_023871208.1 284 KCLGCHKHFDSRTALEQHLRDaH 306 8******************9777 PP
2	zf-C2H2	15.1	6.9e-05	341	362	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 y C+ C+ksF +k ++H+++ XP_023871208.1 341 YDCHMCDKSFATKAARTQHLSS 362 88*****************975 PP
3	zf-C2H2	17.8	8.9e-06	370	390	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 ++C+ C++sF+++ L +H+ XP_023871208.1 370 FPCSRCDRSFNSQTALAQHLE 390 89*****************86 PP
4	zf-C2H2	11.8	0.00074	399	419	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 + C++C+++F +++ +Hir XP_023871208.1 399 FNCGHCNRVFDSPDARDQHIR 419 78*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MRLLNVYTFT LDEFFHPNIP PYVVASHRWV RGHEITLQDI KKHTNTEESG YQKVEGFVHH 60 MKAMLPRITW LWIDTCCINQ ESGPELYEAV NSMFRWYRNS TVCLAYLHDV DGDGKGDASA 120 FAESEWFRRG WTLQELLAPN DVVFLGRSWQ VLGHKSSNGY DGQDMHNHKG PLLTKIISHV 180 TNIPETVLQD YTQASKIPNE QKMGWTQGRM TTREEDLSYC LLGIFDVSMS IIYGEGKDKA 240 DKRLRKKIAS KDRDATRTIT TKRYNEPMAP SPDTAAWQKP LKLKCLGCHK HFDSRTALEQ 300 HLRDAHLHSP IFNCRPCEKE FNSRTALDQH LHNSPAHAPK YDCHMCDKSF ATKAARTQHL 360 SSASAHMEVF PCSRCDRSFN SQTALAQHLE SASAHTRSFN CGHCNRVFDS PDARDQHIRD 420 SPNHVPLRMR RPIGLAAGRA MFTT

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MRLLNVYTFT LDEFFHPNIP PYVVASHRWV RGHEITLQDI KKHTNTEESG YQKVEGFVHH  60
MKAMLPRITW LWIDTCCINQ ESGPELYEAV NSMFRWYRNS TVCLAYLHDV DGDGKGDASA  120
FAESEWFRRG WTLQELLAPN DVVFLGRSWQ VLGHKSSNGY DGQDMHNHKG PLLTKIISHV  180
TNIPETVLQD YTQASKIPNE QKMGWTQGRM TTREEDLSYC LLGIFDVSMS IIYGEGKDKA  240
DKRLRKKIAS KDRDATRTIT TKRYNEPMAP SPDTAAWQKP LKLKCLGCHK HFDSRTALEQ  300
HLRDAHLHSP IFNCRPCEKE FNSRTALDQH LHNSPAHAPK YDCHMCDKSF ATKAARTQHL  360
SSASAHMEVF PCSRCDRSFN SQTALAQHLE SASAHTRSFN CGHCNRVFDS PDARDQHIRD  420
SPNHVPLRMR RPIGLAAGRA MFTT