PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023871131.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 752aa MW: 83708.5 Da PI: 6.3503

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023871131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.2	0.00068	582	619	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+l+P+ + K s + Le++++++ Lq XP_023871131.1 582 RQLIQDRIKELRDLVPNgS------KCSIDSLLERTIKHMLFLQ 619 77899************55......6777778888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MGSYSEKLRT LCLNTGWKYA VFWKFKYRAR MVLTWEDAYY DSHHEQHDAL ANNYSSKTQE 60 KLPDGHYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVTGKH QWIFADKHVT NSCLSYEYCD 120 GWQTQFSAGI RTIVVVSVAP HGVVQLGSLN KVNEDMKLVN HIRDVFLTLQ DSSMEHIPSP 180 IQCSMKNLLR LQHMSTNSLA SEIIPDGLRN LDKAIDRERP DVWVSMFPYF GKDSDSSYAF 240 PPHDFYQEKA VEVVNNHGGL ELSTSGGDES AKFHSSKSKI VNLEHQKLVG VRVVDDRKCA 300 GENSGCKDMG VCSESNANSF SHNSATDSVN LYDVIVPADK VGVDFTYLSS DLLDSAVCDR 360 FKLDGIGFYE NGLLQKPESL EMKVHKDLDK LDFQTESSHM DILNTSLNFP AGCELQEVLG 420 PAFLKKSDYF DWQAEKTEDR TALAMPEGMS SSQLTSDSHP DHLLEAVVAN VCQSGSDIKS 480 EKPFCKPVQS LLTTEVSPEP SSHTVHTITS AAYSFEKSSL VGDDKQHCLS SSGVCGAISP 540 TGFSSNCPSS CSEQLERSSE PAKNNKKRAR PGENCRPRPR DRQLIQDRIK ELRDLVPNGS 600 KCSIDSLLER TIKHMLFLQS ITKHADKLNK CANLKLHNKE PGMVSCSSSE HGSSWAVEVG 660 GHLKVCSIIV ENLNKNGQML VEMLCEECSH FLEIAEAIRS LGLTILKGVT EAHGEKTWIC 720 FVVEGQNNRN IHRMDILWSL VQILQPKQAM QQ

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MGSYSEKLRT LCLNTGWKYA VFWKFKYRAR MVLTWEDAYY DSHHEQHDAL ANNYSSKTQE  60
KLPDGHYSHD PLGLAVAKMS YHVYSLGEGI VGQVAVTGKH QWIFADKHVT NSCLSYEYCD  120
GWQTQFSAGI RTIVVVSVAP HGVVQLGSLN KVNEDMKLVN HIRDVFLTLQ DSSMEHIPSP  180
IQCSMKNLLR LQHMSTNSLA SEIIPDGLRN LDKAIDRERP DVWVSMFPYF GKDSDSSYAF  240
PPHDFYQEKA VEVVNNHGGL ELSTSGGDES AKFHSSKSKI VNLEHQKLVG VRVVDDRKCA  300
GENSGCKDMG VCSESNANSF SHNSATDSVN LYDVIVPADK VGVDFTYLSS DLLDSAVCDR  360
FKLDGIGFYE NGLLQKPESL EMKVHKDLDK LDFQTESSHM DILNTSLNFP AGCELQEVLG  420
PAFLKKSDYF DWQAEKTEDR TALAMPEGMS SSQLTSDSHP DHLLEAVVAN VCQSGSDIKS  480
EKPFCKPVQS LLTTEVSPEP SSHTVHTITS AAYSFEKSSL VGDDKQHCLS SSGVCGAISP  540
TGFSSNCPSS CSEQLERSSE PAKNNKKRAR PGENCRPRPR DRQLIQDRIK ELRDLVPNGS  600
KCSIDSLLER TIKHMLFLQS ITKHADKLNK CANLKLHNKE PGMVSCSSSE HGSSWAVEVG  660
GHLKVCSIIV ENLNKNGQML VEMLCEECSH FLEIAEAIRS LGLTILKGVT EAHGEKTWIC  720
FVVEGQNNRN IHRMDILWSL VQILQPKQAM QQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein