PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554454.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 499aa MW: 55973.6 Da PI: 6.3901

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.4e-10	441	496	1	47
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 r+rW+teE+e l+++v+++ + Wk+I + ++Rt+ ++k++w++ XP_023554454.1 441 RMRWSTEEEEMLKEGVHRFSSTdsknvPWKKILEFGHhvfdNTRTPVDLKDKWRNI 496 89*****************************988899*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MCRKTVRTKS RRGGKSRLSR RSAASTPPPV ASPSFSDQDA PNAEGNTPND GFVSCKDVLN 60 AEDNTVYEAS RNETNDVLDN IDCFQKDTCI RCDKSGDLLV CTEIGCPIAL HELCMSCEPS 120 FDEEGRFYCP YCSYKRALVR VNESRRNAMV AKRALSNFVD TRMVGGGNLL QIGEAGKKKA 180 SNVSTRGVDA NQPNHGSRWG NDSSRDQDTQ VGQNQSNERE DHVRIARDVQ ASSTVGVIGE 240 NHDGPIVSNI SKGVYSTPEV HPCEDSMNEE ETREADTLGT HQVESLEDED GEMMDEENLR 300 STDNLQDDEI AKDRGQPATT SAYRDGETAQ EPQEQDKDDG GEQIHPNNEG MFEDTGLASG 360 NNDLKDETIM KKKRFKIKAN RRSNRQKFNS PRKSLRLQTS SPGKDHATKI EKASASRNLR 420 MQPASRNQFK SFDFHGGKRK RMRWSTEEEE MLKEGVHRFS STDSKNVPWK KILEFGHHVF 480 DNTRTPVDLK DKWRNILAK

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MCRKTVRTKS RRGGKSRLSR RSAASTPPPV ASPSFSDQDA PNAEGNTPND GFVSCKDVLN  60
AEDNTVYEAS RNETNDVLDN IDCFQKDTCI RCDKSGDLLV CTEIGCPIAL HELCMSCEPS  120
FDEEGRFYCP YCSYKRALVR VNESRRNAMV AKRALSNFVD TRMVGGGNLL QIGEAGKKKA  180
SNVSTRGVDA NQPNHGSRWG NDSSRDQDTQ VGQNQSNERE DHVRIARDVQ ASSTVGVIGE  240
NHDGPIVSNI SKGVYSTPEV HPCEDSMNEE ETREADTLGT HQVESLEDED GEMMDEENLR  300
STDNLQDDEI AKDRGQPATT SAYRDGETAQ EPQEQDKDDG GEQIHPNNEG MFEDTGLASG  360
NNDLKDETIM KKKRFKIKAN RRSNRQKFNS PRKSLRLQTS SPGKDHATKI EKASASRNLR  420
MQPASRNQFK SFDFHGGKRK RMRWSTEEEE MLKEGVHRFS STDSKNVPWK KILEFGHHVF  480
DNTRTPVDLK DKWRNILAK