PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023554416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | FAR1 | ||||||||
Protein Properties | Length: 671aa MW: 77905.9 Da PI: 7.0845 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.7 | 9.6e-24 | 76 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++++fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_023554416.1 76 EYYSNFARKNGFSIRKARSTESQNLG-VYRQDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 167 69********************8888.******************************************998767789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 671 aa Download sequence |
MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SARLVKSETV PSQLSSESVF 60 TPYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRQDFVCY RSGYNQPRKK 120 ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK 180 IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA 240 LLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENVSFD TSYRSLTYGL LLGVWFGMSN 300 HGKAIIFGCV LLQEENSHSF SWALQKFVQF MRGKHPRTIL TDIDSGLRDA ISRELPNTKH 360 VVCIWHILSK LSSWFLLPLG LHYADFKVQF DMLWHLENIS DFEHQWDLLV AQFGLASDKH 420 IALLYLYRAS WPFSFIRSSF LARTLTADFF QSLETFLKRI LGAQTCLQVF FEQVSNAAYS 480 RSRAKEGMQY LHIKTGMPIE EHAQSTLTPY AFNVLQNEIV LSMQYVATEM GNGSYLLQHY 540 KKMDVERLVS WTQDDEQVHC ACKEFDHSGI LCRHSIRVLA VKNYFKLPDK YFLLRWRQNS 600 LGTIDDAHSQ GRSEACAQVF HSLAATLLTE SLISQERFNY VHRELSGLLE HVRTMPVVDE 660 FSLTVNEFND P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |