PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023554408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | FAR1 | ||||||||
Protein Properties | Length: 694aa MW: 80412.6 Da PI: 6.9215 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 75.6 | 1e-23 | 76 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++++fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_023554408.1 76 EYYSNFARKNGFSIRKARSTESQNLG-VYRQDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 167 69********************8888.******************************************998767789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 694 aa Download sequence |
MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SARLVKSETV PSQLSSESVF 60 TPYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRQDFVCY RSGYNQPRKK 120 ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK 180 IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA 240 LLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENGKVE NLSWAYGDPI HAYSVFGDVV 300 SFDTSYRSLT YGLLLGVWFG MSNHGKAIIF GCVLLQEENS HSFSWALQKF VQFMRGKHPR 360 TILTDIDSGL RDAISRELPN TKHVVCIWHI LSKLSSWFLL PLGLHYADFK VQFDMLWHLE 420 NISDFEHQWD LLVAQFGLAS DKHIALLYLY RASWPFSFIR SSFLARTLTA DFFQSLETFL 480 KRILGAQTCL QVFFEQVSNA AYSRSRAKEG MQYLHIKTGM PIEEHAQSTL TPYAFNVLQN 540 EIVLSMQYVA TEMGNGSYLL QHYKKMDVER LVSWTQDDEQ VHCACKEFDH SGILCRHSIR 600 VLAVKNYFKL PDKYFLLRWR QNSLGTIDDA HSQGRSEACA QVFHSLAATL LTESLISQER 660 FNYVHRELSG LLEHVRTMPV VDEFSLTVNE FNDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |