PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023554182.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 293aa    MW: 34202.3 Da    PI: 6.3084
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023554182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.62.9e-5481361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk+k++++k++l +vi ++d+yk+ePwd+++     ++e+kewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_023554182.1   8 VPPGFRFHPTEEELVGYYLKRKINSQKIDL-DVIMDIDLYKMEPWDIQAnckFGYEEQKEWYFFSHKDRKYPTGTRTNRATSAGFWKATGRDKAV 101
                     69****************************.99**************953432234677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ls k++++g++ktLvfykgrap+g+ktdW+mheyr 
  XP_023554182.1 102 LS-KNRVIGMRKTLVFYKGRAPNGRKTDWIMHEYRH 136
                     **.8999***************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEILESCVPP GFRFHPTEEE LVGYYLKRKI NSQKIDLDVI MDIDLYKMEP WDIQANCKFG  60
YEEQKEWYFF SHKDRKYPTG TRTNRATSAG FWKATGRDKA VLSKNRVIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRHQTSE LAPVQEEGWV VCRAFKKPSP TQNQAIGAWN SYQHQALYYD  180
LKNNNNNSTF SDAMIPTHMV NSSDQLPNYH LQLLQQQQQN YQLVQLPSLE SPTLSTNFET  240
NETKRNNNNN HDDPCLEWNV NLDDILCSSQ IVETSCSSYP NLPETFVDFC NDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-106NAC family protein