PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554002.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 1088aa MW: 121113 Da PI: 6.1555

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.5	4.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+++vl+cyYah+een++fqr XP_023554002.1 20 IEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_023554002.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP 180 SPTSPLTPFC EDGDTDTGQA TSRFRSFPTS PKMGNGLLMN KQDAGQSNFY FPHSSSNTSV 240 PAVDYVSQVQ KDVLGGNICG TNVTDSQKTL SSASWEEILQ HCTTGFQTVP SHVLSSLIEP 300 VSSGIVVGQE NSIPGQPSTS NSAITEDFGS SLTMNSNWQV SFEDNTSSFS KEYVDQFPEL 360 YSVYDIDSRL TEQNSHNATF GSGREMSCAH PGIENEEILP NNLELQVKEG ESYSAMRLSS 420 ENDKSKEGTV GYSLSLKQSL IDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV 480 ECGDMVDNSS LTPSLSEDQL FSITEFSPKW TLADLETEVV IIGKFLGNNH GTKCYWSCMF 540 GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EIREFDYLAG SAQDVDVTEV 600 YTAGATEELY LHMRLERLLS HRSSNPPNNL SEGALAKRNL IRELISIKEE EDCYGEEPNS 660 HNVQIQHQNK EFLFVKLMKE KVYSWLIRKV IEGGKGPHIL DDEGQGLIHL AAALGYDWAI 720 RPIVAAGVSI NFRDVNGWTA LHWAAFCGRE LTVGTLITLN AAPGLPADPS PKNPLGISPS 780 ELASMSGHKG IAGFLAESSL TSYIESISMG ETVKDGVLDV SKRKPVHTIS ERRATPISDG 840 FMPADLSLKD SLTAVCNATQ AAGRIHLMFR MQSFQRKKLS ECSPDELGSS DDTAISFAKA 900 RARKSGLSNS PAHAAAVHIQ KKFRGWRMRK EFLLIRQRIV KIQAHVRGHQ VRKQYKKIVW 960 SVGILDKIIL RWRRKGSGLR GFRSDAAAKN PSAVMEPPKE DDYDFLAKGR KQTEERFQKA 1020 LTRVKSMAQY PEGRDQYRRL LTVVQKCQET KASNMAITST REEIIEGDDM IDIDSLLDDD 1080 ALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP  180
SPTSPLTPFC EDGDTDTGQA TSRFRSFPTS PKMGNGLLMN KQDAGQSNFY FPHSSSNTSV  240
PAVDYVSQVQ KDVLGGNICG TNVTDSQKTL SSASWEEILQ HCTTGFQTVP SHVLSSLIEP  300
VSSGIVVGQE NSIPGQPSTS NSAITEDFGS SLTMNSNWQV SFEDNTSSFS KEYVDQFPEL  360
YSVYDIDSRL TEQNSHNATF GSGREMSCAH PGIENEEILP NNLELQVKEG ESYSAMRLSS  420
ENDKSKEGTV GYSLSLKQSL IDGEESLKKV DSFSRWVSRE LVEVDDLHMH PSSGLSWSTV  480
ECGDMVDNSS LTPSLSEDQL FSITEFSPKW TLADLETEVV IIGKFLGNNH GTKCYWSCMF  540
GEVEVPAEVL ADGILCCHAP PHSVGQVPFY VTCSNRLACS EIREFDYLAG SAQDVDVTEV  600
YTAGATEELY LHMRLERLLS HRSSNPPNNL SEGALAKRNL IRELISIKEE EDCYGEEPNS  660
HNVQIQHQNK EFLFVKLMKE KVYSWLIRKV IEGGKGPHIL DDEGQGLIHL AAALGYDWAI  720
RPIVAAGVSI NFRDVNGWTA LHWAAFCGRE LTVGTLITLN AAPGLPADPS PKNPLGISPS  780
ELASMSGHKG IAGFLAESSL TSYIESISMG ETVKDGVLDV SKRKPVHTIS ERRATPISDG  840
FMPADLSLKD SLTAVCNATQ AAGRIHLMFR MQSFQRKKLS ECSPDELGSS DDTAISFAKA  900
RARKSGLSNS PAHAAAVHIQ KKFRGWRMRK EFLLIRQRIV KIQAHVRGHQ VRKQYKKIVW  960
SVGILDKIIL RWRRKGSGLR GFRSDAAAKN PSAVMEPPKE DDYDFLAKGR KQTEERFQKA  1020
LTRVKSMAQY PEGRDQYRRL LTVVQKCQET KASNMAITST REEIIEGDDM IDIDSLLDDD  1080
ALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein