PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | DBB | ||||||||
Protein Properties | Length: 213aa MW: 23291.2 Da PI: 7.2162 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26.8 | 1.1e-08 | 3 | 43 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C l+ H+ H+ XP_023553894.1 3 IRCDVCDQAEASVFCYADEAALCHGCDLHVHRAnklagkHS 43 58*****************************7666666665 PP | |||||||
2 | zf-B_box | 28.7 | 2.7e-09 | 55 | 92 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++e ++ fC++++ +C++C ++H+ Ht XP_023553894.1 55 SPRCDICQERRALVFCQQDRAIICRECDISIHETneHT 92 689*****************************767775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MKIRCDVCDQ AEASVFCYAD EAALCHGCDL HVHRANKLAG KHSRFSLIQP IKKDSPRCDI 60 CQERRALVFC QQDRAIICRE CDISIHETNE HTQKHSRFLL TGVKLSSTCF SSQTSSSSHG 120 CDAAMDVKTG SSHACSKKPK IAVKAISSHS AEKAAPSTSN YKVEDGQASD GGSFSTSSIS 180 EYLETLPEWC LEEFLDPSAV ANHFCKVRST PSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39070.1 | 1e-56 | DBB family protein |