PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553836.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 278aa    MW: 30757.8 Da    PI: 7.9829
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.6e-1157100855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++      K++K++ + +Av++I+ Lq
  XP_023553836.1  57 TERERRKKMRTMFANLHALLPHL----PAKVDKSSLVDEAVNHIRTLQ 100
                     6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSSLHHLPWA LLNSCSDKDH FPPPPTQSGK KREAAAVAAE RKSCGGAASA HDIHIWTERE  60
RRKKMRTMFA NLHALLPHLP AKVDKSSLVD EAVNHIRTLQ QTLQNLHKQK LERLNNDTNP  120
SLSFSKIVHH PSARSSAATT REAFLADQAS STNDMSSTLF PQLSTVAAAG DNVVSILPSP  180
PSSFQTWLSS NLVLNVCGHH AHFCICSVKK PGLFPTLCYV LEKHEIHVVS AHVSSDYHRS  240
FFMIHAHVNG GYDEFEAATV AEDTFKEAAR EIIFWLSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-39bHLH family protein