PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 225aa MW: 25598.9 Da PI: 8.4851 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ + R++k+c++rw +yl XP_023553736.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSAgLLRCGKSCRLRWINYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.3e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_023553736.1 68 RGNLTKEEEETIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 113 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSAGLLRC GKSCRLRWIN 60 YLRPDIKRGN LTKEEEETII KLHRVLGNRW SAIAARLPGR TDNEIKNVWN THLKKRQNYT 120 AMNRRICGGD EEPATQPFKF TTFHSMQNPA STSSPPHCSR ESSSIVLPEN GDLSTNNLPE 180 ADENFWVEVL AGDQIATVES QQGFGGESQG QFDSMNFWYN ICSRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 1e-71 | MYB family protein |