PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553567.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 969aa MW: 109009 Da PI: 7.5562

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	125.4	2.4e-39	14	95	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqrr+yw+Lee+l++ivlvhylev+ XP_023553567.1 14 GGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQRRTYWMLEEDLSHIVLVHYLEVQ 95 69******************9887.9**************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence
MAESGRYTPG NSIGGSLFLY DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC 60 YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET 120 TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ 180 RSNMESTSRE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK DSNHAESIHE LHKNLCFSSD 240 NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDEIMGL PFSDRCKRED FGNHLLAQED 300 CEAILEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE 360 NEVGNSSISS QAHQDTYMFS RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLRSKQEV 420 ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC 480 IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW 540 DQFMKPRWDE NVSLGSTKEL LLQRLLKDKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA 600 ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK 660 YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK KGKAVDTCGE KAVHTASERV 720 ATPHQGNDMH ALSLKDSLAA VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK 780 RRNSGSHDEH AAAIRIQNKF RSWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRNIVWSVG 840 ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD DEFLKKGRKQ TEERLQKALA 900 RVKSMVQYPE ARDQYRRLLN VVTEMRQTKV KDGVVDNVDE TADFDDLIDI EALLDEDAFL 960 PNASSNFSV

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence

MAESGRYTPG NSIGGSLFLY DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC  60
YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET  120
TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ  180
RSNMESTSRE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK DSNHAESIHE LHKNLCFSSD  240
NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDEIMGL PFSDRCKRED FGNHLLAQED  300
CEAILEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE  360
NEVGNSSISS QAHQDTYMFS RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLRSKQEV  420
ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC  480
IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW  540
DQFMKPRWDE NVSLGSTKEL LLQRLLKDKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA  600
ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK  660
YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK KGKAVDTCGE KAVHTASERV  720
ATPHQGNDMH ALSLKDSLAA VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK  780
RRNSGSHDEH AAAIRIQNKF RSWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRNIVWSVG  840
ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD DEFLKKGRKQ TEERLQKALA  900
RVKSMVQYPE ARDQYRRLLN VVTEMRQTKV KDGVVDNVDE TADFDDLIDI EALLDEDAFL  960
PNASSNFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein