PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553566.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 1005aa MW: 113171 Da PI: 7.4599

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164	2.6e-51	20	135	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ k+rwl++ ei++iL+n++k+++++e++t p+sgsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqr XP_023553566.1 20 LEAKHRWLRPAEICEILKNHDKFSIASEPATMPPSGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQR 113 6679**************************************************9887.9***************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l++ivlvhylev+ XP_023553566.1 114 RTYWMLEEDLSHIVLVHYLEVQ 135 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1005 aa Download sequence
MAESGRYTPG NSIDIEQILL EAKHRWLRPA EICEILKNHD KFSIASEPAT MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE 120 EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ 180 ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL 240 SAFGGNGFPT SSDRSKDSNH AESIHELHKN LCFSSDNVLK SGATGIYSPH LQPSFSTSRP 300 KILDNVPKQG DEIMGLPFSD RCKREDFGNH LLAQEDCEAI LEGKSKFAKK QPLLNAITTE 360 ALRKSDSFNQ WMSRELGDVK EASMQCNSGA HWNSVENEVG NSSISSQAHQ DTYMFSRSLS 420 HEQLFSIIDF SPSWAYEGSE IKVLISGKFL RSKQEVENLK WSCMFGEVEV PAEVIANGVL 480 RCFTPMHKAG RVPFYVTRSN RLACSEVQNF EYRVKCIQDV EVMYDTSITN EALALRFVKL 540 LCLSCSDTLI ADPNSSSDRS GFNKVRELLK VDNSEWDQFM KPRWDENVSL GSTKELLLQR 600 LLKDKLHVWL LQKVREGGRG PSVLDEHGQG VLHFAAALNY DWALLPAVVA GINVNFRDAN 660 GWTALHWAAF FGRERTVAAL ISLGAAPGAL TDPSPKYPHG RTPADLASSN GHKGIAGYLG 720 ESALSAHLES LNFDNKKGKA VDTCGEKAVH TASERVATPH QGNDMHALSL KDSLAAVSNA 780 TQAAARIHEV MRMQSFQKKQ LLDLSNYQPL SLLPVKRRNS GSHDEHAAAI RIQNKFRSWK 840 GRKDFLIIRQ RIVKIQAHVR GHQVRKNYRN IVWSVGILEK VILRWRRKGS GLRGFKAEAL 900 SEDSSKQNPS VTEDDDDEFL KKGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVTE 960 MRQTKVKDGV VDNVDETADF DDLIDIEALL DEDAFLPNAS SNFSV

Sequence ? help Back to Top

Protein Sequence Length: 1005 aa Download sequence

MAESGRYTPG NSIDIEQILL EAKHRWLRPA EICEILKNHD KFSIASEPAT MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE  120
EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ  180
ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL  240
SAFGGNGFPT SSDRSKDSNH AESIHELHKN LCFSSDNVLK SGATGIYSPH LQPSFSTSRP  300
KILDNVPKQG DEIMGLPFSD RCKREDFGNH LLAQEDCEAI LEGKSKFAKK QPLLNAITTE  360
ALRKSDSFNQ WMSRELGDVK EASMQCNSGA HWNSVENEVG NSSISSQAHQ DTYMFSRSLS  420
HEQLFSIIDF SPSWAYEGSE IKVLISGKFL RSKQEVENLK WSCMFGEVEV PAEVIANGVL  480
RCFTPMHKAG RVPFYVTRSN RLACSEVQNF EYRVKCIQDV EVMYDTSITN EALALRFVKL  540
LCLSCSDTLI ADPNSSSDRS GFNKVRELLK VDNSEWDQFM KPRWDENVSL GSTKELLLQR  600
LLKDKLHVWL LQKVREGGRG PSVLDEHGQG VLHFAAALNY DWALLPAVVA GINVNFRDAN  660
GWTALHWAAF FGRERTVAAL ISLGAAPGAL TDPSPKYPHG RTPADLASSN GHKGIAGYLG  720
ESALSAHLES LNFDNKKGKA VDTCGEKAVH TASERVATPH QGNDMHALSL KDSLAAVSNA  780
TQAAARIHEV MRMQSFQKKQ LLDLSNYQPL SLLPVKRRNS GSHDEHAAAI RIQNKFRSWK  840
GRKDFLIIRQ RIVKIQAHVR GHQVRKNYRN IVWSVGILEK VILRWRRKGS GLRGFKAEAL  900
SEDSSKQNPS VTEDDDDEFL KKGRKQTEER LQKALARVKS MVQYPEARDQ YRRLLNVVTE  960
MRQTKVKDGV VDNVDETADF DDLIDIEALL DEDAFLPNAS SNFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein