PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553565.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CAMTA

Protein Properties

Length: 1009aa MW: 113663 Da PI: 7.3644

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553565.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164	2.6e-51	20	135	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ k+rwl++ ei++iL+n++k+++++e++t p+sgsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqr XP_023553565.1 20 LEAKHRWLRPAEICEILKNHDKFSIASEPATMPPSGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQR 113 6679**************************************************9887.9***************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l++ivlvhylev+ XP_023553565.1 114 RTYWMLEEDLSHIVLVHYLEVQ 135 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MAESGRYTPG NSIDIEQILL EAKHRWLRPA EICEILKNHD KFSIASEPAT MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE 120 EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ 180 ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL 240 SENFTAFGGN GFPTSSDRSK DSNHAESIHE LHKNLCFSSD NVLKSGATGI YSPHLQPSFS 300 TSRPKILDNV PKQGDEIMGL PFSDRCKRED FGNHLLAQED CEAILEGKSK FAKKQPLLNA 360 ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHQDTYMFS 420 RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLRSKQEV ENLKWSCMFG EVEVPAEVIA 480 NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR 540 FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL 600 LLQRLLKDKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF 660 RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA 720 GYLGESALSA HLESLNFDNK KGKAVDTCGE KAVHTASERV ATPHQGNDMH ALSLKDSLAA 780 VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF 840 RSWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRNIVWSVG ILEKVILRWR RKGSGLRGFK 900 AEALSEDSSK QNPSVTEDDD DEFLKKGRKQ TEERLQKALA RVKSMVQYPE ARDQYRRLLN 960 VVTEMRQTKV KDGVVDNVDE TADFDDLIDI EALLDEDAFL PNASSNFSV

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MAESGRYTPG NSIDIEQILL EAKHRWLRPA EICEILKNHD KFSIASEPAT MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE  120
EDLSHIVLVH YLEVQSSRAN LNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ  180
ILSQTTEISL NSAQASEYED AVSEYGNRES NVFHSFLGLQ RSNMESTSRE PCDPNYPAPL  240
SENFTAFGGN GFPTSSDRSK DSNHAESIHE LHKNLCFSSD NVLKSGATGI YSPHLQPSFS  300
TSRPKILDNV PKQGDEIMGL PFSDRCKRED FGNHLLAQED CEAILEGKSK FAKKQPLLNA  360
ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHQDTYMFS  420
RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLRSKQEV ENLKWSCMFG EVEVPAEVIA  480
NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR  540
FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL  600
LLQRLLKDKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF  660
RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA  720
GYLGESALSA HLESLNFDNK KGKAVDTCGE KAVHTASERV ATPHQGNDMH ALSLKDSLAA  780
VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF  840
RSWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRNIVWSVG ILEKVILRWR RKGSGLRGFK  900
AEALSEDSSK QNPSVTEDDD DEFLKKGRKQ TEERLQKALA RVKSMVQYPE ARDQYRRLLN  960
VVTEMRQTKV KDGVVDNVDE TADFDDLIDI EALLDEDAFL PNASSNFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein