PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553515.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 296aa MW: 32263.2 Da PI: 5.3464

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.5e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C +++H H++vpl XP_023553515.1 4 QCNVCEMAEATVLCCADEAALCWACDEKIHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	29.4	1.6e-09	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C +++H H XP_023553515.1 52 SQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTAntyvtgH 94 689*******************************654455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MKIQCNVCEM AEATVLCCAD EAALCWACDE KIHAANKLAS KHQRVPLSDS SSQMPKCDIC 60 QEASGYIFCL EDRALLCRKC DVAIHTANTY VTGHQRFLLT GVKVALEPTD PVPCSSMPKS 120 HSQVKPTETK VRPLSEREFS LPSPGELSRC LSVQGGSEDF MGNGTFHTGD TVSGGFSQWQ 180 MDDLINLTGF NQNYGFLDSG SSKADSGKLG DSDSSPVLRA ADIELDDNDE CSGQVPEASW 240 TVPQIPSPPT ASGLYWPRSY HNSMDGAVFV PDISGSSEKV QHCSHNGRFL KRRRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-94	DBB family protein