PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 257aa MW: 29518.6 Da PI: 6.1629 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.5 | 1.3e-19 | 39 | 92 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++f++eq++ Le+ F++ +++++ +++ +LA++lgL+ rq+ +WFqNrRa++k XP_023553124.1 39 KRRFSDEQIRSLESIFYSsDSKLDSRKKVQLATELGLQPRQIAIWFQNRRARWK 92 578**************98**********************************9 PP | |||||||
2 | HD-ZIP_I/II | 114 | 9.2e-37 | 38 | 130 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE+ F +++ kL++++Kv+la+eLglqprq+a+WFqnrRAR+k+k++E+++++L+++yd+l+++ ++L++e+++L ++l++ XP_023553124.1 38 NKRRFSDEQIRSLESIFYSSDsKLDSRKKVQLATELGLQPRQIAIWFQNRRARWKSKEMENNFRSLRANYDNLASQFKTLQEEKNSLLSQLQK 130 69***************88777********************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEREEYFIVP NLETAAVASS QTCSTPRRRR KKKTNNMNKR RFSDEQIRSL ESIFYSSDSK 60 LDSRKKVQLA TELGLQPRQI AIWFQNRRAR WKSKEMENNF RSLRANYDNL ASQFKTLQEE 120 KNSLLSQLQK LSELVQEGPR EGHYSNEIAK TIYETKEKPQ SFHDELGQSG VTYLNNNYNT 180 DKRGTENGEG DRGLEMTHSS EGISNDISHA VEQACQLLNP NSSFESSENW CGFDSDGGGI 240 IFECQPCSSL QELSFWG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 33 | RRRRKKK |
2 | 27 | 41 | RRRRKKKTNNMNKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 7e-33 | HD-ZIP family protein |