PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553091.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 335aa MW: 39239.8 Da PI: 6.3209

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+ +++++l +vik+vd+yk+ePwdL++ ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_023553091.1 7 VPPGFRFHPTDEELVDYYLRKKICSRRIDL-DVIKDVDLYKIEPWDLKEicSLGTeDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********854533332566******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ lvg++ktLvfykgrap+g+k+dW+mheyrle XP_023553091.1 101 YS-KHDLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MNTFLHVPPG FRFHPTDEEL VDYYLRKKIC SRRIDLDVIK DVDLYKIEPW DLKEICSLGT 60 EDQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT VRRMNEHESP CWYDEPVSFM 180 PDLDSPNQSS HTHFPHHLSN FPCKKEEDFP YQLGQPQTHF LHLPTLETQK LANTFALDIN 240 LQASNFQPTA AKQQNIQHQQ QQQLSDQNLL FLFEDDSSNN NNNNEQTMNE LTDWRVFDKY 300 VASQLSQENA SKQQPMVPEN APPTSSSSCQ IELWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-118	NAC family protein