PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552947.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 282aa    MW: 31100.2 Da    PI: 8.7178
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.7e-392180362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +  lkcprC+stntkfCyynny+l+qPr+fCk+CrryWtkGGalrn+P+Ggg+rknkk +
  XP_023552947.1 21 QPPLKCPRCNSTNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNIPIGGGCRKNKKLK 80
                    5679*****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MKAPLQQQPI TQNDPDSQRS QPPLKCPRCN STNTKFCYYN NYNLTQPRHF CKTCRRYWTK  60
GGALRNIPIG GGCRKNKKLK SSSSNSNFLT GISPSIDFSA IGSGGSLFPC SCFSLGQTPA  120
TIPAANYSSM GLYNLNDNTQ QLASSIESLS YLNQDLHWRL QQQRLGMIYG DHDQNQKFLQ  180
PISFQSLETP KQEAFFDNNH PRKDSTPATA TATATAAATG TTTTATTEWT FGNNDSYHHH  240
QMSITSNSSR NIGSNAGGSG YNNNNNNNGV EANWDDLVHF TT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-42Dof family protein