PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552894.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 266aa MW: 30042.4 Da PI: 6.6003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	4.8e-14	81	128	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ ++f L llP + kK++Ka+iL A++YIk+Lq XP_023552894.1 81 KDHVLAERKRREKLSQRFIALSALLPGL-----KKMDKASILGDAIKYIKQLQ 128 56999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEGEQDSSLL FHDQYQLFNA TPTSDSPPLF NHWRSCGGSA AVASSSSQMI LFQEGKFCPA 60 AAAAAEIWPL VNVGRNPPRA KDHVLAERKR REKLSQRFIA LSALLPGLKK MDKASILGDA 120 IKYIKQLQER VESLEEMGKN SNIEAAILIK KSHLCNNMND CCDDIDGEEH NHKTGFSDQK 180 LVEIEAKISD KHVLVRIHCE KHEGLLAKLL EEMEKLNFKI INVNVFPFGS STQYMVFLLQ 240 RNSDLNIESK ELVRKLEDEL FKFITA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	92	ERKRRE
2	88	93	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-42	bHLH family protein