PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552865.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 348aa MW: 39305.6 Da PI: 8.3692

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.5	4.5e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+kv++++l + e ik++diyk++PwdLpk ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_023552865.1 14 MLPGFRFHPTDEELVGFYLKRKVQQRPLLI-ELIKQIDIYKYDPWDLPKLGGSGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579**********************999.89***********87778999**********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl XP_023552865.1 108 dGTKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEERNEGEKA EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP 60 KLGGSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV 120 FYKGRAAKGV KTDWMMHEFR LPSLTHPSPT KRFVDKSIPP NDSWAICRIF KKTNSTAQRA 180 LSLSSNIPPL CDNAFTKNDT FFPTKPTLPY FETLTQSSIS NAYPFDFVGS CKPFSTQTTN 240 TFAHLPILAE PSPNATEQDK SRVDLSSILL NMSSSVLGEF GIKPIADTID LHANQQFINN 300 YPQPFSHEMQ AGGDQFGAMM RSSVGCPFVW DSSSSCPSEV STTTNCYT

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEERNEGEKA EELMLPGFRF HPTDEELVGF YLKRKVQQRP LLIELIKQID IYKYDPWDLP  60
KLGGSGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYKGRAAKGV KTDWMMHEFR LPSLTHPSPT KRFVDKSIPP NDSWAICRIF KKTNSTAQRA  180
LSLSSNIPPL CDNAFTKNDT FFPTKPTLPY FETLTQSSIS NAYPFDFVGS CKPFSTQTTN  240
TFAHLPILAE PSPNATEQDK SRVDLSSILL NMSSSVLGEF GIKPIADTID LHANQQFINN  300
YPQPFSHEMQ AGGDQFGAMM RSSVGCPFVW DSSSSCPSEV STTTNCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-103	NAC family protein