PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552861.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 297aa    MW: 32629.7 Da    PI: 6.9673
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.32.1e-55171441128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yL kkv +++++   +i++vd++k+ePwdLp+k+  +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+
  XP_023552861.1  17 LPPGFRFHPTDEELIAHYLLKKVLDSHFSS-PAITHVDLNKSEPWDLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSS 110
                     79*************************999.78***************8888899**************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++l+g+kktLvfy+grapkg+kt+Wvmhe+rl
  XP_023552861.1 111 kTNSLIGMKKTLVFYRGRAPKGQKTNWVMHEFRL 144
                     56677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MDHGGSGGGH QSSDGFLPPG FRFHPTDEEL IAHYLLKKVL DSHFSSPAIT HVDLNKSEPW  60
DLPEKALMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA TGKDREIMSS KTNSLIGMKK  120
TLVFYRGRAP KGQKTNWVMH EFRLAGKFAY HFLSADSSKD EWVISKVFKK TGAAMHGGSS  180
TRKSRLDPEP SSSSSVSLPP LLDSSADPSE HELHVTCFST NNVNYPAGGG SDLSPSVFPN  240
LLSFQENLQA PFFSPVGPPL VHLLTDAAEL VGCGDGPAPE DSRLVGSADM AAYMWTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.18e-93NAC family protein