PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 675aa MW: 74983.3 Da PI: 6.7868 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.2 | 5.7e-52 | 92 | 219 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptd+el+++yL+ k++g++ ++ vi+evd++k+ePwdLp + +k++++ew+fF+++d+ky++g+r +rat +g+Wkatgkd++++ XP_023552565.1 92 LPLGFRFRPTDQELIDYYLRSKINGNHQDV-CVIREVDVCKWEPWDLPdlSILKTKDREWFFFCPQDRKYPNGHRLKRATVAGFWKATGKDRKIK 185 699************************999.88**************96447788999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr XP_023552565.1 186 S-GTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRT 219 *.99*****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 675 aa Download sequence |
MNNINSRPDA FFILVNYRNK IKKSNSLLVT VFSSFSLKTK SHSLSPLSYS LFIKTKNLSG 60 RPVTSFPLFF FIFANPSPLF SPSMAVLTLN SLPLGFRFRP TDQELIDYYL RSKINGNHQD 120 VCVIREVDVC KWEPWDLPDL SILKTKDREW FFFCPQDRKY PNGHRLKRAT VAGFWKATGK 180 DRKIKSGTKL IGMKKTLVFY KGRAPKGKRT NWVVHEYRTT LKELDGTNPG QNAFVLCRLF 240 KKQDESIEGS NGDEAEAAIS SPTTTESSPG PGDSHSEPIL PLDSPSLQRQ AEISDGVLSE 300 TVEHTDGSVD IHGFDSYNVE MDPHPDEERK FSGPENQPLD SKLYSPLHSQ LQAELGSSCI 360 YYSDSNYLNY GANPNAEQLQ IGAEDFDFIH QMLDSFVYNS DDYALEDQQE SMSLSEFPNN 420 SMASLDNRAF GKVEADNGKA LAMPDFESSI CLEDIDRKTP IIDHLGTAAP EQGLLYNPSG 480 SLQESYNHLS VVGNTDASTG IQRMSRRPRS VQQPNEFSTF QGIAPRRLRL QRKLVAPSSC 540 SSNTCSESSR WQDDDPPSIS SKVKKASENK TTGGDGGSVA ATVDVVKQPQ AMPDADSGVG 600 SSKASQEVSA KLVASDSPTI DFLTGKRRLV TALLPSILSY VSVVRLVVVA LSIIFISIWK 660 CRNREQRGYL VSPFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 8e-91 | NAC family protein |