PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552564.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 676aa MW: 75111.5 Da PI: 6.7868

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.2	5.7e-52	92	219	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptd+el+++yL+ k++g++ ++ vi+evd++k+ePwdLp + +k++++ew+fF+++d+ky++g+r +rat +g+Wkatgkd++++ XP_023552564.1 92 LPLGFRFRPTDQELIDYYLRSKINGNHQDV-CVIREVDVCKWEPWDLPdlSILKTKDREWFFFCPQDRKYPNGHRLKRATVAGFWKATGKDRKIK 185 699**********************999.88**********96447788999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr XP_023552564.1 186 S-GTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRT 219 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MNNINSRPDA FFILVNYRNK IKKSNSLLVT VFSSFSLKTK SHSLSPLSYS LFIKTKNLSG 60 RPVTSFPLFF FIFANPSPLF SPSMAVLTLN SLPLGFRFRP TDQELIDYYL RSKINGNHQD 120 VCVIREVDVC KWEPWDLPDL SILKTKDREW FFFCPQDRKY PNGHRLKRAT VAGFWKATGK 180 DRKIKSGTKL IGMKKTLVFY KGRAPKGKRT NWVVHEYRTT LKELDGTNPG QNAFVLCRLF 240 KKQDESIEGS NGDEAEAAIS SPTTTESSPG PGDSHSEPIL PLDSPSLQRQ AEISDGVLSE 300 TVEHTDGSVD IHGFDSYNVE MDPHPDEERK FSGPENQPLD SKLYSPLHSQ LQAELGSSCI 360 YYSDSNYLNY GANPNAEQLQ IGAEDFDFIH QMLDSFVYNS DDYALEDQQE SMSLSEFPNN 420 SMASLDNRAF GKVEADNGKA LQAMPDFESS ICLEDIDRKT PIIDHLGTAA PEQGLLYNPS 480 GSLQESYNHL SVVGNTDAST GIQRMSRRPR SVQQPNEFST FQGIAPRRLR LQRKLVAPSS 540 CSSNTCSESS RWQDDDPPSI SSKVKKASEN KTTGGDGGSV AATVDVVKQP QAMPDADSGV 600 GSSKASQEVS AKLVASDSPT IDFLTGKRRL VTALLPSILS YVSVVRLVVV ALSIIFISIW 660 KCRNREQRGY LVSPFC

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MNNINSRPDA FFILVNYRNK IKKSNSLLVT VFSSFSLKTK SHSLSPLSYS LFIKTKNLSG  60
RPVTSFPLFF FIFANPSPLF SPSMAVLTLN SLPLGFRFRP TDQELIDYYL RSKINGNHQD  120
VCVIREVDVC KWEPWDLPDL SILKTKDREW FFFCPQDRKY PNGHRLKRAT VAGFWKATGK  180
DRKIKSGTKL IGMKKTLVFY KGRAPKGKRT NWVVHEYRTT LKELDGTNPG QNAFVLCRLF  240
KKQDESIEGS NGDEAEAAIS SPTTTESSPG PGDSHSEPIL PLDSPSLQRQ AEISDGVLSE  300
TVEHTDGSVD IHGFDSYNVE MDPHPDEERK FSGPENQPLD SKLYSPLHSQ LQAELGSSCI  360
YYSDSNYLNY GANPNAEQLQ IGAEDFDFIH QMLDSFVYNS DDYALEDQQE SMSLSEFPNN  420
SMASLDNRAF GKVEADNGKA LQAMPDFESS ICLEDIDRKT PIIDHLGTAA PEQGLLYNPS  480
GSLQESYNHL SVVGNTDAST GIQRMSRRPR SVQQPNEFST FQGIAPRRLR LQRKLVAPSS  540
CSSNTCSESS RWQDDDPPSI SSKVKKASEN KTTGGDGGSV AATVDVVKQP QAMPDADSGV  600
GSSKASQEVS AKLVASDSPT IDFLTGKRRL VTALLPSILS YVSVVRLVVV ALSIIFISIW  660
KCRNREQRGY LVSPFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	3e-90	NAC family protein