PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YB | ||||||||
Protein Properties | Length: 232aa MW: 25515.2 Da PI: 8.1361 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 176.3 | 3.1e-55 | 31 | 126 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianvsrimkk lP nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv +lk+yl+kyre+e+e XP_023552553.1 31 KEQDRFLPIANVSRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVTTLKTYLNKYRETEEE 125 89*******************************************************************************************98 PP NF-YB 97 k 97 k XP_023552553.1 126 K 126 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MNGHKRNPTT ATNSSPVGSP TSGNISDSST KEQDRFLPIA NVSRIMKKSL PPNAKISKEA 60 KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFENYVT TLKTYLNKYR 120 ETEEEKHSLA RQDDHSPSPA KSTAAVCPAE PIIGGKSANS VMDFQNLNSG FYSLGAHNHN 180 HNHHQGNQKS YHIIDGVGFG ENLRGFNLSA VHENEGNRGR AMAAHLQQSS GW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 8e-62 | NF-YB family protein |