PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552288.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 260aa MW: 29411.4 Da PI: 9.3264 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40 | 9.4e-13 | 30 | 74 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a++++ + Wk+I + +g +t q++s+ qky XP_023552288.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MALPFDTAAT SLRDDLLKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG 60 SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAARPY PQKTSTNALA LVSGPFQSSS 120 LEPNYIIKPD SSSAPASFMA DNSTQMVNFS QSARGQVIEN NCCSSTDRTT RARFPTKSSV 180 EEHNKLPLRV LPDFGQVYNF IGSVFDPKAS DHLQKLKQMD QIDVETVMLL MRNLAINLTG 240 PDFEDHKKVL SSYDAFMEHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 2e-95 | MYB_related family protein |