PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 151aa MW: 17585.1 Da PI: 10.6166 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.2e-15 | 11 | 56 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 +g+WT+eEde+lv++v+++G+++W++ r g + Rt+k+c++rw + XP_023552141.1 11 KGPWTAEEDEILVNYVNKFGPRDWSS-LRSKGlLPRTGKSCRLRWVN 56 79************************.66667788**********87 PP | |||||||
2 | Myb_DNA-binding | 43.5 | 7.1e-14 | 67 | 108 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+ +++ +q+G++ W++Ia ++ gRt++++k++w + XP_023552141.1 67 KFSAEEERVVIELQAQFGNK-WAKIATYLE-GRTDNDVKNFWST 108 79******************.*********.***********65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MERQNGVNMK KGPWTAEEDE ILVNYVNKFG PRDWSSLRSK GLLPRTGKSC RLRWVNRLQP 60 NLKTGCKFSA EEERVVIELQ AQFGNKWAKI ATYLEGRTDN DVKNFWSTRR KRLERILQIP 120 PQKSQKNKQR SLEPQGLYEL PALEVTVSHS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 1e-64 | MYB family protein |